Standardised access to Gene, Gene-Variant, Protein, Metabolite and Interaction Identifier Mapping Services

BridgeDb is a framework to map identifiers between various biological databases. These mappings are provided for genes, proteins, genetic variants, metabolites, and metabolic reactions. BridgeDb includes a Java library that provides an API for programmatic access.

NEWS: Find the latest tutorials on BridgeDb in the FAIR-plus cookbook here .

Framework and libraries

Identifier Mapping Databases

Tutorials and Workflows

Webservice and API

Webservice implementation
Docker and semantic web



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How to cite

Contributing organisations