Standardised access to Gene, Gene-Variant, Protein, Metabolite and Interaction Identifier Mapping Services

BridgeDb is a framework to map identifiers between various biological databases. These mappings are provided for genes, proteins, genetic variants, metabolites, and metabolic reactions. BridgeDb includes a Java library that provides an API for programmatic access.

NEWS: Find the latest tutorials on BridgeDb in the FAIR-plus cookbook here .


Framework and libraries

Identifier Mapping Databases

Tutorials and Workflows

Webservice and API

Webservice implementation
Docker and semantic web

Documentation

Collaborators

Contact us

How to cite

Contributing organisations