Gene-variant mappings
These identifier mapping databases contain mappings extracted from Ensembl.
- Webpage: https://figshare.com/collections/BridgeDb_Gene-to-variant_mapping_database_archive/4290308
- Author: Jonathan Mélius (ORCID), Friederike Ehrhart (ORCID)
- License: http://www.apache.org/licenses/LICENSE-2.0.html
- Mapping Source (latests): Ensembl r96 & dbSNP b151
- Source code: https://github.com/BiGCAT-UM/BridgeDbVariantDatabase
- Issues: https://github.com/BiGCAT-UM/BridgeDbVariantDatabase/issues
Download the latest gene-variant mapping databases from the BridgeDb Gene-to-variant mapping database archive. DOI: 10.6084/m9.figshare.c.4290308.v1
Source
Ensembl versions available: 85, 86, 88, 90–96. Example for Ensembl version 91:
Database | Build date |
Exon located SNPs | 2018-06-04 |
Missense causing SNPs | 2018-06-07 |
Protein Truncating (PTV) SNPs | 2018-06-07 |
PTV and Missense causing SNPs | 2018-06-07 |
Polyphen based SNPs | 2018-07-18 |